There are firewall settings that don't change when new programs modify windows advanced firewall. These rules sit beneath and supersede the main windows advanced firewall rules.
Type here to search-> "Local Security Policy" -> Click Local Security Policy.
There is a folder Windows Defender Firewall, with the same layout. Put your rules in here and they won't change, and they override the other rules.
I have also found out that these rules can be scripted by the command netsh, so I might make something later on.
